BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007C12SP1|AL425676
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1613 1576 0.0
>3x_Contig1613
Length = 13977
Score = 1576 bits (795), Expect = 0.0
Identities = 795/795 (100%)
Strand = Plus / Plus
Query: 1 gatccgtaaagtccttagtggctaagagcgtacccaattggatatacaaccctaaaccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11364 gatccgtaaagtccttagtggctaagagcgtacccaattggatatacaaccctaaaccga 11423
Query: 61 ccgtctacgctactgcaacgtgtattttggtggaacctaaatggtttaaatacgtttcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11424 ccgtctacgctactgcaacgtgtattttggtggaacctaaatggtttaaatacgtttcat 11483
Query: 121 ggattaacatattctgatctaataccaccttaaggtctccgttatatatgccaataatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11484 ggattaacatattctgatctaataccaccttaaggtctccgttatatatgccaataatat 11543
Query: 181 tatatttagttcacatactacaacattcaatattaagtataccatatgctagcattgtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11544 tatatttagttcacatactacaacattcaatattaagtataccatatgctagcattgtac 11603
Query: 241 tggtgctcggacatgatgaataccagttaattcatcatcccattcccactattgtattgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11604 tggtgctcggacatgatgaataccagttaattcatcatcccattcccactattgtattgt 11663
Query: 301 ttggtccgggtaataataatacagactattcatatctgctattttctttgacatctttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11664 ttggtccgggtaataataatacagactattcatatctgctattttctttgacatctttaa 11723
Query: 361 attgaaagatcgaatttctaaacagaaaaggttttaacacaggacagaacggttattcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11724 attgaaagatcgaatttctaaacagaaaaggttttaacacaggacagaacggttattcaa 11783
Query: 421 attttggaccgttaaggaacgtagtttttggtcttagttaagttttttacactgctggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11784 attttggaccgttaaggaacgtagtttttggtcttagttaagttttttacactgctggta 11843
Query: 481 acatcataacaggtgcaacagactactgtacacactttgagcgcgggagggacacgccga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11844 acatcataacaggtgcaacagactactgtacacactttgagcgcgggagggacacgccga 11903
Query: 541 acttacagaagtatttttcgcaagttattattaaggtggtaagaaagcgtgttattaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11904 acttacagaagtatttttcgcaagttattattaaggtggtaagaaagcgtgttattaagt 11963
Query: 601 actctgttttctaaaattgatacttaagagttttttcttgcgattgatctagcttttgag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11964 actctgttttctaaaattgatacttaagagttttttcttgcgattgatctagcttttgag 12023
Query: 661 atacgatctgaatttaccaggataatctgctacaggaacgtgaatctttattgccgtatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12024 atacgatctgaatttaccaggataatctgctacaggaacgtgaatctttattgccgtatc 12083
Query: 721 ttagcatcaacttattaacttaacacaagggtgtttttttttccggaatttcagcatttc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12084 ttagcatcaacttattaacttaacacaagggtgtttttttttccggaatttcagcatttc 12143
Query: 781 attatcattacaaga 795
|||||||||||||||
Sbjct: 12144 attatcattacaaga 12158
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6862
Number of Sequences: 1807
Number of extensions: 6862
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)